BioInfo

Software

Structural Bioinformatics

VARNA

VARNA

Visualization Applet for RNA

Website: http://varna.lri.fr

GenRGenS

GenRGenS

Generation of Random Genomic Sequences and Structures

Website: http://www.lri.fr/~genrgens/

NestdAlign

NestdAlign

Pairwise RNA secondary structure comparison

Website: http://nestedalign.lri.fr/js-index.php

Rna3Dmotif

Rna3Dmotif

Software for extracting RNA tertiary motifs

Website: http://rna3dmotif.lri.fr

Cartaj

Cartaj

Classification Of RNA threeway Junctions

Website: http://cartaj.lri.fr

Computational Systems Biology

HSim

HSim

Hyperstructure Simulator

Website: https://www.lri.fr/~pa/Hsim/

Orphea

Orphea

Searches in a genome for mRNA candidate to -1 Frame Shift during the translation phase

Website: http://orphea.lri.fr/

Pint

Pint

Static analyzer for dynamics of Automata Networks

Website: http://loicpauleve.name/pint

Causalex

Causalex

Causality Graph Explorer

Website: https://www.lri.fr/logiciel.brevet.php?log=179

Data Integration

ConQuR-Bio

ConQuR-Bio

Consensus ranking with Query Reformulation

Website: http://conqur-bio.lri.fr

GeneValorization

GeneValorization

Gene List significance at-a-glance

Website: http://www.bioguide-project.net/gv/

SPFlow

SPFlow

Rewriting a non SP workflow into an SP workflow while preserving provenance

Website: https://www.lri.fr/~chenj/SPFlow/

DistillFlow

DistillFlow

Refactoring workflows for better (re)use

Website: https://www.lri.fr/~chenj/DistillFlow/

GenoQuery

GenoQuery

Querying genomic data warehouse

Website: http://www.lri.fr/~chris/GenoQuery